For questions about mathematical and computational neuroscience.

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3
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1answer
56 views

Relation between Nengo, SPA and NEF with respect to other Neural Models

I'm working through How to Build a Brain and I keep getting confused on the relation between Nengo, the Semantic Pointer Architecture (SPA) and the Neurological Engineering Framework (NEF). Are there ...
3
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1answer
268 views

What is the difference between computational neuroscience, theoretical neuroscience, and neuroinformatics (if there is one)?

In particular, theoretical and computational neuroscience seem to be synonymous with each other. Neuroinformatics at least seems to deal somewhat more with solving things numerically and the usage and ...
0
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1answer
100 views

What are ways to explore metamathematics from a cognitive science/neuroscience lens?

What are ways to explore metamathematics from a cognitive science/neuroscience lens to understand the evolution of mathematics based on structural and perceptual processing biases introduced due to ...
0
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1answer
64 views

What subjects to study in order to prepare for a research career in theoretical neuroscience?

Which topics in a dual degree in Cognitive science and Computer science at the graduate level or systems neuroscience (experimental + theory) graduate degree will better prepare for a research career ...
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1answer
52 views

Overview of Pitts & McCullough (1943) “A logical calculus of the ideas immanent in nervous activity”

Is there a good tutorial or simplified overview of the paper, 'Logical calculus for nervous activity' (McCullough & Pitts, 1943)? Reference McCullough, W. S., & Pitts, W. (1943). A logical ...
2
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1answer
158 views

Why does optogenetics not mean that perfect brain-computer interfaces are possible?

There have been multiple articles and videos circulating on the Internet claiming that optogenetics has made it possible to have perfect input/output to the brain from a computer. This is obviously ...
2
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1answer
97 views

How do thoughts work at the neuron level?

How does thought work at the biological level of individual neurons? I believe there are many neurons which are active in the brain at the same time. For example, our senses are constantly taking in ...
8
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4answers
617 views

What are the mathematical models of memory?

Are there mathematical models of memory in humans or animals? I want to know how neuroscientists use mathematics to describe memory in living creatures. How do neuroscientists model memory and show ...
3
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1answer
62 views

Neuroscience student [closed]

I'm thinking about studying neuroscience, but the only interests I have in the general area are: Where thought or consciousness come from and how it all works How memory works and why it can't be ...
4
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1answer
77 views

What does a cortical column do?

The Blue Brain project led by Henry Markram focused on simulating cortical columns under the idea they form basic processing units of the brain/cognitive function. What does a cortical column do? I ...
5
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1answer
159 views

Cosyne vs CNS conferences for Computational Neuroscience?

While Googling, I noticed there are 2 conferences for computational neuroscience: Cosyne and CNS. My questions are: 1) What are these conferences' differences in terms of material & impact/size? ...
3
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1answer
177 views

How does cognitive science explain distant intentionality and brain function in recipients?

Achterberg and colleagues' (2005) study, Concluded that instructions to a healer to make an intentional connection with a sensory isolated person can be correlated to changes in brain function ...
3
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1answer
51 views

What are “linear spatial weightings” and “specific temporal windows” in Philiastides & Sajda (2006)?

I am undergraduate student in mathematics and a complete beginner in the field of neuroscience. I recently started a project in Mathematical biology which brought me to the above mentioned paper. I ...
7
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2answers
91 views

What is the difference between spike-triggered averaging and reverse correlation?

I'm interested in the difference between spike-triggered averaging and reverse correlation. In some papers (i.e., Schwartz, Odelia, et al) I see the term 'Spike Triggered Averaging'. In others, (ie ...
5
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1answer
162 views

Computational model of biological object recognition

The human brain can achieve a remarkable ability to recognize visual patterns in an Invariant, selective and fast manner. The human visual system is quite powerful. It has an exquisite selectivity ...
4
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2answers
156 views

Can a biological entity be thought as a simple algorithm? Case-study with the concept of randomness

John Von Neuman believed that all organisms can be though of as information-processing systems. He built on the work of Alan Turing (algorithmic) to create simulations of biological entities. This ...
12
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1answer
197 views

How does the brain calculate velocity?

How does the human brain calculate velocities? For example, when crossing a road and seeing a car coming towards you, how does the brain actually compute the rough velocity of the vehicle and your own ...
6
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3answers
143 views

How does the brain compute sound localisation without the equations?

What sort of computations are used for localising sound with the ears, and how does the brain compute the time difference between sounds reaching each ear? I am interested in the specific mechanisms ...
7
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1answer
58 views

What are biologically plausible ways to model binocular disparity?

I figure there is a vast body of literature on stereovision, both neurophysiological and computational studies. Computer Vision also provides some algorithmic insight on implementing binocular ...
4
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0answers
205 views

Is “Biophysics of Computation” still a good book?

To begin with, I hope this is the right place to ask - if not, please don't be too mad about it :) Currently I'm studying mathematics (2nd year) and I think I'm pretty into neuroscience. To "test" ...
0
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2answers
168 views

As for future mind control/reading technology, can humans fight it?

As of recent times, rats have communicated through wireless brain implants, from across the globe. Also, recent fMRI technologies have allowed prediction of movements (or intention), and the ...
4
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2answers
83 views

Is there a function between loss of memory and time?

I have 2 related questions with regards to memory capabilities and time: "Is there a function (e.g. $e^{-\Delta Time}$) with regards to memory loss?" Everyone is bound to forget over time. Is there ...
6
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1answer
85 views

In a central pattern generator based on reciprocal inhibition, how does one “side” get picked over the other to start out?

Consider two neurons, A and B, which reciprocally inhibit each other. If both of the neurons receive input at the same time, it seems to me that no oscillation will occur between the two. Such would ...
8
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1answer
88 views

Have there been any mechanisms proposed for normalization in probabilistic population codes?

I heard a talk yesterday by Dora Angelaki about multi-sensory integration. Part of the talk was about bayesian inference with multiple noisy sources of information. I know that there has been a lot ...
9
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1answer
136 views

Can we draw conclusions about content of thoughts from neural firing patterns?

Can the neural firing patterns of animals be associated with specific kinds of thoughts? (ie Thoughts related to food, mating, or neighborly aggression?) I am curious about the speculations in ...
2
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0answers
210 views

How much information does the somatosensory system produce?

Are there any approximations of how many bits of information human somatosensory system produces? Especially mechano-receptors as measured in average number of bits per area of skin per second? I've ...
14
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7answers
2k views

Difference between parallel processing done by human brain and by computers

I am asking a question regarding parallel processing as done by billions of Neurons inside our brain and parallel processing done by our computers in a cluster for example or even on a Graphics ...
6
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0answers
116 views

How can I test whether Dorsal Raphe Nucleus(DRN) activity at night is related to variations in mood?

I'm reading this paper, which discusses Serotonin activity in the Dorsal Ralphe Nucleus(DRN), and even includes some mathematical models of how serotonin is released and reabsorbed. The paper states ...
10
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2answers
176 views

Computational Model Linking Neural Activity to Behavior

A big question in neuroscience is how neural activity represents knowledge. We can use modelling to explore how different levels of neural activity- subthreshold currents, action potentials, local ...
7
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1answer
143 views

Hebbian Learning Rule, Local or Global?

I just learned about the Hebbian Learning Rule. It essentially says "Neurons that fire together, wire together". I'm wondering if the learning rule is affected by the spatial distance of the two ...
7
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1answer
103 views

Can processing effort for sub-tasks in neural networks be measured?

I often heard statements like: 80% of your brain processing is computing the effect of gravity or, similarily: You only use 20% of your brain power My question isn't about the truth of ...
8
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1answer
147 views

How can STDP fit with reciprocal connectivity?

I have rather technical question regarding STDP dynamics. I am working on a neural network implementing an STDP learning algorithm, and have noticed that it is extremely anti-reciprocal. When two ...
12
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3answers
440 views

What are the key examples of the use of computational methods in the study of biological neural networks?

In an upcoming postdoc, I'm going to be looking through biological neural network data in the hopes of finding some interesting "patterns". I'm coming at this field from a mathematics/computer ...
23
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2answers
1k views

What are current neuronal explanations and models of 'consciousness'?

I would like to understand more about consciousness from a neuroscientific perspective. I have a limited understanding of it in the philosophical/psychological sense through lectures. Although it is ...
18
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2answers
788 views

Applications of computational learning theory in the cognitive sciences

Computational learning theory (CoLT) is a branch of theoretical computer science associated with the mathematical analysis of machine learning. A lot of the early ideas of the field take inspiration ...
8
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1answer
115 views

What is the role of traveling waves in circuit formation during cortical development?

Propagating waves of activity have been characterized in various regions of the brain such as the visual cortex (Nauhaus et al., 2012). Recently they have been reported for the first time to occur ...
10
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1answer
199 views

What explains variability in the mean firing rate across biological neurons?

Biological neurons have a trade-off between high information transfer (high firing rate) and energy conservation (low firing rate). One would suspect that the maximization of this function has a ...
13
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2answers
531 views

Biological plausibility of bayesian models of cognition

Inspired by this question: What are drawbacks to probabilistic models of cognition? I would like to know more about the biological plausibility of Bayesian models of cognition. Is there any neural ...
10
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1answer
295 views

How does neural spiking begin in the fetus?

I'm interested in modeling human brain spiking activity. How does the very first spiking activity begin in the fetus? I imagine all spiking activity is initiated by the senses and internal ...
9
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2answers
698 views

In what ways can neurons fire randomly?

When developing a model of a biologically-plausible neural network, it is important to know all the circumstances under which neurons can fire. But, I am limiting this question to random firing. In ...
11
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2answers
260 views

References for biologically plausible models of knowledge representation?

I'm looking for references that deal with the issue of how various kinds of semantic knowledge are (or might be) represented neurally. Most of the discussion of this topic seems skewed by social ...
9
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1answer
154 views

Is there evidence that STDP is responsible for the ability to infer causation?

Spike timing dependent plasticity (STDP) is a property of synapses that modifies their efficacy based on timing relationships between action potentials in the pre-synaptic and post-synaptic neuron. A ...
25
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3answers
16k views

Why would the brain flip the images perceived by your eyes?

The following is a common scientific statement, which you don't have to google long for to find: The eye views images upside-down in the manner of a camera lens, but our brains reinterpret this ...
16
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2answers
323 views

How are newly created neurons recruited into existing networks?

As far as I understand, the basics of neurogenesis (abstracted down to the level that makes sense to a computer scientist) is as follows: Neural progenitor cells differentiate into new neurons that ...
22
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2answers
872 views

What is an effective metric of complexity for an Artificial Neural Network?

After asking the question What is the most complex neural network... I realized I don't really have a good metric of "complexity" in a general sense. The simplest measure would likely be count of ...
13
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1answer
254 views

Computational models of early learning in children

What are currently used biologically plausible computational models/frameworks of early learning in children? Personally, I have used cascade correlation neural nets to model pronoun acquisition ...
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2answers
1k views

Neural networks with biologically plausible accounts of neurogenesis

One of the reasons artificial neural net algorithms like cascade correlation (pdf) have been generating interest is because they start with a minimal topology (just input and output unit) and recruit ...